BactoInteractDB Bacterial–Host Molecular Interactions
and Pathogenic Mechanisms
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Explore the biological knowledge base

Browse bacteria, host proteins, virulence factors, interactions, pathways and diseases. Each tab is generated from the underlying database with source identifiers and links.

BacteriaHost proteinsVirulence factorsInteractionsPathwaysDiseases

Bacterial species

Every species with curated data in the database. Use the box to filter.

SpeciesPhylumProteinsVirulence factorsCurated interactionsHT screen
Yersinia pestisProteobacteria1,2143203,908
Escherichia coliProteobacteria105103230
Bacillus anthracis—1414313
Streptococcus pyogenesFirmicutes615560
Francisella tularensis subsp. novicida (strain ATCC 15482 / CCUG 33449 / U112)—4405
Staphylococcus aureusFirmicutes69869740
Shigella flexneriProteobacteria747440
Salmonella entericaProteobacteria24924920
Listeria monocytogenesFirmicutes353520
Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513)—323220
Pseudomonas aeruginosaProteobacteria525110
Streptococcus dysgalactiae—4410
Clostridium tetani (strain Massachusetts / E88)—3310
Mycobacterium tuberculosisActinobacteria28628600
Bacillus thuringiensis subsp. israelensis—969600
Brucella abortus (strain 2308)—484800
Yersinia enterocoliticaProteobacteria454500
Porphyromonas gingivalis—404000
Chlamydia trachomatis serovar D (strain ATCC VR-885 / DSM 19411 / UW-3/Cx)—404000
Burkholderia pseudomallei (strain 1026b)—393900
Staphylococcus epidermidis—363600
Neisseria meningitidisProteobacteria353500
Vibrio choleraeProteobacteria343400
Yersinia pseudotuberculosis serotype O:3 (strain YPIII)—333300
Helicobacter pyloriProteobacteria303000
Brucella suis biovar 1 (strain 1330)—292900
Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000)—282800
Agrobacterium tumefaciens—272700
Shigella sonnei (strain Ss046)—272700
Streptococcus pneumoniaeFirmicutes252500
Haemophilus influenzae—212100
Pseudomonas savastanoi pv. phaseolicola—212100
Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)—191900
Burkholderia mallei (strain ATCC 23344)—191900
Staphylococcus haemolyticus (strain JCSC1435)—181800
Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A)—171700
Agrobacterium fabrum (strain C58 / ATCC 33970)—161600
Shigella dysenteriaeProteobacteria151500
Mycoplasmoides pneumoniae (strain ATCC 29342 / M129 / Subtype 1)—151500
Erwinia amylovora—151500
Mannheimia haemolytica—151500
Bordetella pertussis (strain ATCC 9797 / DSM 5571 / CCUG 30873 / LMG 14455 / NCTC 10739 / 18323)—141400
Xanthomonas campestris pv. campestris (strain 8004)—131300
Mycoplasmoides genitalium (strain ATCC 33530 / DSM 19775 / NCTC 10195 / G37)—121200
Bartonella henselae—111100
Proteus mirabilis (strain HI4320)—9900
Bacillus cereus (strain Q1)—9900
Clostridium perfringens (strain 13 / Type A)—9900
Dickeya dadantii (strain 3937)—9900
Bartonella quintana (strain Toulouse)—9900
Paraclostridium bifermentans—8800
Mycolicibacterium smegmatis (strain ATCC 700084 / mc(2)155)—8800
Xanthomonas euvesicatoria—8800
Vibrio anguillarum—8800
Mycobacterium leprae (strain Br4923)—8800
Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41)—8800
Yersinia entomophaga—7700
Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50)—7700
Aeromonas hydrophila—7700
Borreliella burgdorferi (strain ATCC 35210 / DSM 4680 / CIP 102532 / B31)—7700
Citrobacter rodentium—7700
Burkholderia thailandensis (strain ATCC 700388 / DSM 13276 / CCUG 48851 / CIP 106301 / E264)—7700
Mycobacterium avium (strain 104)—7700
Ralstonia nicotianae (strain ATCC BAA-1114 / GMI1000)—7700
Mycoplasmoides gallisepticum (strain R(low / passage 15 / clone 2))—7700
Pseudomonas fluorescens—7700
Orientia tsutsugamushi (strain Boryong)—7700
Neisseria gonorrhoeaeProteobacteria6600
Enterococcus faecalis (strain ATCC 700802 / V583)—6600
Lysinibacillus sphaericus—6600
Xanthomonas oryzae pv. oryzicola (strain BLS256)—6600
Streptococcus gordonii—6600
Mycobacterium marinum (strain ATCC BAA-535 / M)—6600
Mycobacterium sp. (strain KMS)—6600
Aeromonas salmonicida—6600
Acinetobacter baumanniiProteobacteria5500
Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)—5500
Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176)—5500
Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253)—5500
Shigella boydii serotype 4 (strain Sb227)—5500
Actinobacillus pleuropneumoniae—5500
Pseudomonas chlororaphis—5500
Ralstonia solanacearum—5500
Dichelobacter nodosus—5500
Clostridioides difficileFirmicutes4400
Paraclostridium sordellii—4400
Vibrio vulnificus—4400
Streptococcus agalactiae serotype III (strain NEM316)—4400
Xanthomonas citri pv. citri (strain 306)—4400
Aggregatibacter actinomycetemcomitans—4400
Brachyspira hyodysenteriae—4400
Pectobacterium carotovorum subsp. carotovorum—4400
Pectobacterium parmentieri—4400
Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512)—4400
Bacillus subtilis (strain 168)—3300
Pantoea stewartii subsp. stewartii—3300
Streptococcus mutans serotype c (strain ATCC 700610 / UA159)—3300
Chlamydia pneumoniae—3300
Serratia marcescens—3300
Mycolicibacterium paratuberculosis (strain ATCC BAA-968 / K-10)—3300
Rickettsia prowazekii (strain Madrid E)—3300
Mycobacterium ulcerans (strain Agy99)—3300
Rickettsia typhi (strain ATCC VR-144 / Wilmington)—3300
Rickettsia conorii (strain ATCC VR-613 / Malish 7)—3300
Haemophilus ducreyi (strain 35000HP / ATCC 700724)—3300
Chlamydia muridarum (strain MoPn / Nigg)—3300
Chlamydia caviae (strain ATCC VR-813 / DSM 19441 / 03DC25 / GPIC)—3300
Chlamydia felis (strain Fe/C-56)—3300
Chlamydia abortus (strain DSM 27085 / S26/3)—3300
Paenibacillus popilliae—3300
Staphylococcus ureilyticus—3300
Staphylococcus cohnii subsp. cohnii—3300
Klebsiella pneumoniaeProteobacteria2200
Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / CCUG 213 / NBRC 12614 / NCIMB 9131 / NCTC 9757 / MK)—2200
Clostridium butyricum—2200
Hathewaya histolytica—2200
Histophilus somni (strain 2336)—2200
Pseudomonas entomophila (strain DSM 28517 / CCUG 61470 / CECT 7985 / L48)—2200
Clostridium novyi—2200
Aeromonas sobria—2200
Kingella kingae—2200
Mycobacteroides abscessus (strain ATCC 19977 / DSM 44196 / CCUG 20993 / CIP 104536 / JCM 13569 / NCTC 13031 / TMC 1543 / L948)—2200
Dickeya chrysanthemi—2200
Bartonella bacilliformis (strain ATCC 35685 / KC583 / Herrer 020/F12,63)—2200
Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)—2200
Stenotrophomonas maltophilia (strain K279a)—2200
Helicobacter mustelae—2200
Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)—2200
Mycolicibacterium vanbaalenii (strain DSM 7251 / JCM 13017 / BCRC 16820 / KCTC 9966 / NRRL B-24157 / PYR-1)—2200
Borreliella afzelii (strain PKo)—2200
Bacillus toyonensis—2200
Grimontia hollisae—2200
Staphylococcus intermedius—2200
Helicobacter hepaticus (strain ATCC 51449 / 3B1)—2200
Erythrobacter litoralis (strain HTCC2594)—2200
Listeria ivanovii—2200
Citrobacter freundii—2200
Anaplasma phagocytophilum (strain HZ)—2200
Brucella anthropi (strain ATCC 49188 / DSM 6882 / CCUG 24695 / JCM 21032 / LMG 3331 / NBRC 15819 / NCTC 12168 / Alc 37)—2200
Riemerella anatipestifer—2200
Vibrio mimicus—2200
Brucella canis (strain ATCC 23365 / NCTC 10854 / RM-666)—2200
Enterobacter cloacae subsp. cloacae (strain ATCC 13047 / DSM 30054 / NBRC 13535 / NCTC 10005 / WDCM 00083 / NCDC 279-56)—1100
Corynebacterium pseudotuberculosis—1100
Cutibacterium acnes—1100
Streptococcus parasanguinis—1100
Bartonella schoenbuchensis (strain DSM 13525 / NCTC 13165 / R1)—1100
Acinetobacter sp. (strain RUH 2624)—1100
Simkania negevensis (strain ATCC VR-1471 / DSM 27360 / Z)—1100
Photorhabdus asymbiotica subsp. asymbiotica (strain ATCC 43949 / 3105-77)—1100
Tannerella forsythia (strain ATCC 43037 / JCM 10827 / CCUG 21028 A / KCTC 5666 / FDC 338)—1100
Mesomycoplasma hyorhinis (strain HUB-1)—1100
Paenibacillus alvei—1100
Nocardia farcinica (strain IFM 10152)—1100
Yersinia ruckeri serotype O1 (strain ATCC 29473 / DSM 18506 / JCM 15110 / CCUG 14190 / NCIMB 2194 / NCTC 12986 / 2396-61)—1100
Gordonia bronchialis (strain ATCC 25592 / DSM 43247 / BCRC 13721 / JCM 3198 / KCTC 3076 / NBRC 16047 / NCTC 10667)—1100
Burkholderia lata (strain ATCC 17760 / DSM 23089 / LMG 22485 / NCIMB 9086 / R18194 / 383)—1100
Chromobacterium sp. (strain ATCC 53434 / SC 14030)—1100
Rickettsia rickettsii—1100
Serratia proteamaculans (strain 568)—1100
Streptococcus suis (strain P1/7)—1100
Pasteurella multocida—1100
Mannheimia glucosida—1100
Aphanizomenon flos-aquae (strain 2012/KM1/D3)—1100
Aeromonas enteropelogenes—1100
Legionella micdadei—1100
Legionella longbeachae—1100
Capnocytophaga ochracea (strain ATCC 27872 / DSM 7271 / CCUG 9716 / JCM 12966 / NCTC 12371 / SS31 / VPI 2845)—1100
Staphylococcus xylosus—1100
Wolbachia pipientis wMel—1100
Arcanobacterium haemolyticum (strain ATCC 9345 / DSM 20595 / CCM 5947 / CCUG 17215 / LMG 16163 / NBRC 15585 / NCTC 8452 / 11018)—1100
Helicobacter felis (strain ATCC 49179 / CCUG 28539 / NCTC 12436 / CS1)—1100
Ewingella americana (strain ATCC 33852 / DSM 4580 / CCUG 14506 / JCM 5911 / LMG 7869 / NCTC 12157 / CDC 1468-78)—1100
Pseudomonas putida (strain GB-1)—1100
Yersinia mollaretii (strain ATCC 43969 / DSM 18520 / CIP 103324 / CNY 7263 / WAIP 204)—1100
Bacillus spizizenii (strain DSM 15029 / JCM 12233 / NBRC 101239 / NRRL B-23049 / TU-B-10)—1100
Rickettsia japonica (strain ATCC VR-1363 / YH)—1100
Listeria seeligeri—1100
Pasteurella haemolytica-like sp. (strain 5943B)—1100
Clostridium haemolyticum—1100
Actinobacillus suis—1100
Pasteurella aerogenes—1100
Mycobacterium intracellulare—1100
Coxiella burnetii (strain RSA 493 / Nine Mile phase I)—1100
Rickettsia bellii (strain RML369-C)—1100
Vibrio splendidus (strain 12B01)—1100
Bacteroides fragilis—1100
Bibersteinia trehalosi—1100
Sinorhizobium fredii (strain NBRC 101917 / NGR234)—1100
Corynebacterium ulcerans—1100
Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni (strain Fiocruz L1-130)—1100
Rhizobium rhizogenes—1100
Campylobacter fetus—1100
Erwinia pyrifoliae—1100
Borreliella valaisiana—1100
Streptococcus downei—1100
Moraxella catarrhalis—1100
Hafnia alvei—1100
Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15)—1100
Staphylococcus lugdunensis—1100
Borreliella japonica—1100
Streptococcus sp. (strain 19909)—1100
Borreliella andersonii—1100
Borrelia bissettiae (strain DSM 17990 / CIP 109136 / DN127)—1100
Borreliella garinii—1100
Borrelia garinii subsp. bavariensis (strain ATCC BAA-2496 / DSM 23469 / PBi)—1100
Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)—1100
Staphylococcus carnosus (strain TM300)—1100
Yersinia kristensenii—1100
Mycoplasma mycoides subsp. mycoides SC (strain CCUG 32753 / NCTC 10114 / PG1)—1100
Streptococcus canis—1100
Salmonella bongori—1100
Streptococcus thermophilus—1100